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Human carboanhydrase F131C_C206S double mutant in complex with 14
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2VVA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 3 M (NH4)2SO4, 50 mM Tris-HCl
Crystal Properties Matthews coefficient Solvent content 2.1 41.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.38 α = 90 b = 41.38 β = 104.09 c = 72.02 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2015-03-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.0 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 15 97.4 0.063 11.2 2.8 73965
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.3 96.9 0.222 5.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2VVA 1.2 15 70248 3698 97.44 0.15522 0.14942 0.1537 0.16852 0.1692 RANDOM 13.24
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.18 0.29 -0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.751 r_dihedral_angle_4_deg 20.434 r_sphericity_free 17.227 r_dihedral_angle_3_deg 12.021 r_dihedral_angle_1_deg 6.32 r_sphericity_bonded 5.488 r_rigid_bond_restr 2.657 r_long_range_B_refined 2.015 r_long_range_B_other 1.785 r_angle_refined_deg 1.289
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.751 r_dihedral_angle_4_deg 20.434 r_sphericity_free 17.227 r_dihedral_angle_3_deg 12.021 r_dihedral_angle_1_deg 6.32 r_sphericity_bonded 5.488 r_rigid_bond_restr 2.657 r_long_range_B_refined 2.015 r_long_range_B_other 1.785 r_angle_refined_deg 1.289 r_scangle_other 1.173 r_scbond_it 1.017 r_scbond_other 1.017 r_angle_other_deg 0.896 r_mcangle_other 0.87 r_mcangle_it 0.869 r_mcbond_it 0.64 r_mcbond_other 0.623 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2044 Nucleic Acid Atoms Solvent Atoms 369 Heterogen Atoms 40
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing