X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.52930.1 M Bis-Tris, 25% w/v PEG3350, pH 6.5
Crystal Properties
Matthews coefficientSolvent content
238.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 84.344α = 90
b = 84.344β = 90
c = 41.809γ = 120
Symmetry
Space GroupP 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315MIRRORS2012-10-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X29A1.075NSLSX29A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.53098.60.1618.64.352602-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5590.50.2395.74

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.529.6949947265499.380.118470.116660.15272RANDOM16.818
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.47-2.474.95
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.03
r_dihedral_angle_4_deg15.976
r_dihedral_angle_3_deg13.517
r_dihedral_angle_1_deg6.327
r_long_range_B_refined6.042
r_long_range_B_other5.992
r_scangle_other4.884
r_scbond_other3.625
r_scbond_it3.62
r_mcangle_it2.932
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.03
r_dihedral_angle_4_deg15.976
r_dihedral_angle_3_deg13.517
r_dihedral_angle_1_deg6.327
r_long_range_B_refined6.042
r_long_range_B_other5.992
r_scangle_other4.884
r_scbond_other3.625
r_scbond_it3.62
r_mcangle_it2.932
r_mcangle_other2.932
r_mcbond_it2.193
r_mcbond_other2.161
r_angle_refined_deg1.676
r_angle_other_deg0.742
r_chiral_restr0.104
r_gen_planes_refined0.017
r_bond_refined_d0.016
r_gen_planes_other0.002
r_bond_other_d
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2564
Nucleic Acid Atoms
Solvent Atoms298
Heterogen Atoms58

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PHASERphasing