Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A2-DNA structure
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D 1H-15N SOFAST-HMQC
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Varian INOVA 800
2
2D 1H-13C SOFAST-HMQC
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Varian INOVA 800
3
2D 1H-13C HSQC aliphatic
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Varian INOVA 800
4
2D 1H-1H NOESY
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Varian INOVA 800
5
2D 1H-1H TOCSY
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Bruker AVANCE II 600
6
2D DQF-COSY
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Bruker AVANCE II 600
7
2D 1H-31P HSQC
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Bruker AVANCE II 600
8
2D 1H-13C TROSY
3.5 mM DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3')
90% H2O/10% D2O
100 mM
6.8
1 atm
298
Varian INOVA 800
9
2D 1H-13C TROSY
3.5 mM DNA (5'-D(*GP*CP*CP*AP*AP*TP*CP*GP*AP*TP*GP*C)-3')