6Q6E
Structural and functional insights into the condensin ATPase cycle
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCA | 0.4 mM [U-100% 13C; U-100% 15N;U-100% 2H] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
2 | 3D HNCACB | 0.4 mM [U-100% 13C; U-100% 15N;U-100% 2H] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
3 | 3D HN(CO)CA | 0.4 mM [U-100% 13C; U-100% 15N;U-100% 2H] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
4 | 3D HN(COCA)CB | 0.4 mM [U-100% 13C; U-100% 15N;U-100% 2H] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
5 | 3D 1H-15N NOESY | 0.8 mM [U-100% 13C; U-100% 15N] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
6 | 3D 1H-13C NOESY aliphatic | 0.8 mM [U-100% 13C; U-100% 15N] Ct Smc2 Brn1 fusion protein | 90% H2O/10% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
8 | 3D 1H-13C NOESY aliphatic | 0.6 mM [U-100% 13C; U-100% 15N] Ct Smc2 Brn1 fusion protein | 100% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
7 | 3D 1H-13C NOESY aromatic | 0.6 mM [U-100% 13C; U-100% 15N] Ct Smc2 Brn1 fusion protein | 100% D2O | 50 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 800 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 800 |
2 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure calculation | CNS | 1.2 | Brunger A. T. et.al. |
2 | structure calculation | ARIA | Linge, O'Donoghue and Nilges | |
3 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
4 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
5 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax |