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Structure of Chloroflexus aggregans Cagg_3753 LOV domain C85A variant (CagFbFP)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 295 200 mM Ammonium citrate dibasic, 20% (w/v) PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.32 47.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.934 α = 90 b = 110.044 β = 90 c = 38.945 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2017-10-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.9724 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.07 48.43 99.6 0.066 0.074 0.031 0.998 9.6 5.3 102522
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.07 1.09 97.8 2.06 2.302 1.002 0.293 5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.07 48.43 97254 5195 99.43 0.1259 0.1247 0.126 0.1484 0.1511 RANDOM 18.487
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.19 -0.2
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 34.542 r_dihedral_angle_2_deg 34.362 r_dihedral_angle_4_deg 20.221 r_sphericity_bonded 13.72 r_dihedral_angle_3_deg 10.333 r_dihedral_angle_1_deg 6.788 r_rigid_bond_restr 5.487 r_angle_refined_deg 2.044 r_angle_other_deg 1.011 r_chiral_restr 0.137
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 34.542 r_dihedral_angle_2_deg 34.362 r_dihedral_angle_4_deg 20.221 r_sphericity_bonded 13.72 r_dihedral_angle_3_deg 10.333 r_dihedral_angle_1_deg 6.788 r_rigid_bond_restr 5.487 r_angle_refined_deg 2.044 r_angle_other_deg 1.011 r_chiral_restr 0.137 r_bond_refined_d 0.021 r_gen_planes_refined 0.014 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1607 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 86
Software Software Software Name Purpose Aimless data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction MOLREP phasing