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NMR solution structure of unbound recombinant human Nerve Growth Factor (rhNGF)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 2 2D 1H-15N HSQC 0.1 mM [U-99% 15N] Nerve Growth Factor, 50 mM HEPES 90% H2O/10% D2O 50 mM 7 1 atm 303 Agilent VNMRS 800 3 3D 1H-15N NOESY 0.1 mM [U-99% 15N] Nerve Growth Factor, 50 mM HEPES 90% H2O/10% D2O 50 mM 7 1 atm 303 Agilent VNMRS 800 1 3D HNCA 0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES 90% H2O/10% D2O 50 mM 7 1 atm 303 Agilent VNMRS 800 4 2D 1H-13C HSQC aliphatic 0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES 90% H2O/10% D2O 50 mM 7 1 atm 303 Agilent VNMRS 800 5 3D 1H-13C NOESY aliphatic 0.1 mM [U-99% 13C; U-99% 15N] Nerve Growth Factor, 50 mM HEPES 90% H2O/10% D2O 50 mM 7 1 atm 303 Agilent VNMRS 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Agilent VNMRS 800
NMR Refinement Method Details Software simulated annealing ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 refinement ARIA 2.3.2 Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E., Nilges M. 2 structure calculation ARIA 2.3.2 Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E., Nilges M. 3 data analysis CARA Keller and Wuthrich 4 peak picking CARA Keller and Wuthrich 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax