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NMR solution structure of the carbohydrate-binding module family 73 (CBM73) from Cellvibrio japonicus CjLPMO10A
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.1 mM CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 2 2D 1H-1H NOESY 0.1 mM CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 100% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 3 2D 1H-15N HSQC 0.1 mM [U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 4 3D CBCA(CO)NH 0.1 mM [U-13C; U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 5 3D 1H-15N NOESY 0.1 mM [U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 6 2D 1H-13C HSQC 0.1 mM [U-13C; U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 7 2D 1H-15N HSQC 0.1 mM CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 8 2D 1H-13C HSQC 0.1 mM CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 100% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 9 3D HNCA 0.1 mM [U-13C; U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 10 3D HCCH-TOCSY 0.1 mM [U-13C; U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800 11 3D 1H-13C NOESY 0.1 mM [U-13C; U-15N] CBM73, 25 mM sodium phosphate, 10 mM sodium chloride 90% H2O/10% D2O 55 mM 5.5 1 atm 298 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 800
NMR Refinement Method Details Software simulated annealing the structures are based on 656 NOE-derived distance constraints, 66 dihedral angle restraints and 2 disulphide bond restraints CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 256 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 processing TopSpin 3.5 Bruker Biospin 2 chemical shift assignment CARA 1.5.5 Keller and Wuthrich 3 structure calculation CYANA 3.98.13 Guntert, Mumenthaler and Wuthrich 4 refinement YASARA 14.6.23 Elmar Krieger, Keehyoung Joo, Jinwoo Lee,3 Jooyoung Lee, Srivatsan Raman,
James Thompson, Mike Tyka, David Baker, and Kevin Karplus