☰ Navigation Tabs
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(1-phenylethoxy)benzamide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 293 30% PEG 300, 0.1M MES buffer pH6.5
Crystal Properties Matthews coefficient Solvent content 2.22 44.65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.615 α = 90 b = 52.296 β = 90 c = 31.882 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN A200 2015-03-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 1.54178
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 28.55 92.5 0.055 0.99 16.4 4 12655
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.83 89.1 0.35 0.587 3.1 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS FREE R-VALUE 1.7 28.55 12535 633 90.768 0.174 0.1706 0.1814 0.2321 0.2379 25.325
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.227 -0.193 -0.033
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.643 r_dihedral_angle_4_deg 17.673 r_dihedral_angle_3_deg 12.438 r_lrange_it 5.866 r_lrange_other 5.864 r_dihedral_angle_1_deg 4.88 r_scangle_it 2.809 r_scangle_other 2.808 r_mcangle_other 2.355 r_mcangle_it 2.352
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.643 r_dihedral_angle_4_deg 17.673 r_dihedral_angle_3_deg 12.438 r_lrange_it 5.866 r_lrange_other 5.864 r_dihedral_angle_1_deg 4.88 r_scangle_it 2.809 r_scangle_other 2.808 r_mcangle_other 2.355 r_mcangle_it 2.352 r_scbond_it 1.704 r_scbond_other 1.703 r_mcbond_it 1.417 r_mcbond_other 1.399 r_angle_refined_deg 1.298 r_angle_other_deg 1.292 r_nbd_refined 0.199 r_nbd_other 0.177 r_symmetry_nbd_other 0.17 r_symmetry_nbd_refined 0.17 r_nbtor_refined 0.169 r_symmetry_xyhbond_nbd_refined 0.144 r_xyhbond_nbd_refined 0.133 r_symmetry_xyhbond_nbd_other 0.113 r_symmetry_nbtor_other 0.08 r_chiral_restr 0.072 r_xyhbond_nbd_other 0.016 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 931 Nucleic Acid Atoms Solvent Atoms 218 Heterogen Atoms 38
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling