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Crystal structure analysis of cp3 bound BCLxl
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 277 PEG 400, Tris, Magnesium chloride
Crystal Properties Matthews coefficient Solvent content 2.54 51.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.52 α = 90 b = 99.874 β = 90 c = 51.197 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M mirrors 2021-05-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL19U1 0.976 SSRF BL19U1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 99.4 0.136 0.142 0.04 0.992 5.7 12.5 35428
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.42 97.4 0.596 0.625 0.182 0.881 10.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.4 24.98 32773 1743 96.68 0.1632 0.16222 0.18147 0.2096 RANDOM 15.294
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.18 -0.06 -0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.972 r_dihedral_angle_4_deg 20.631 r_dihedral_angle_3_deg 10.74 r_long_range_B_refined 5.54 r_long_range_B_other 5.54 r_dihedral_angle_1_deg 5.398 r_scangle_other 4.597 r_scbond_it 3.017 r_scbond_other 3.015 r_angle_other_deg 2.691
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.972 r_dihedral_angle_4_deg 20.631 r_dihedral_angle_3_deg 10.74 r_long_range_B_refined 5.54 r_long_range_B_other 5.54 r_dihedral_angle_1_deg 5.398 r_scangle_other 4.597 r_scbond_it 3.017 r_scbond_other 3.015 r_angle_other_deg 2.691 r_mcangle_other 2.51 r_mcangle_it 2.507 r_angle_refined_deg 2.072 r_mcbond_it 1.771 r_mcbond_other 1.693 r_chiral_restr 0.094 r_bond_refined_d 0.016 r_gen_planes_refined 0.016 r_gen_planes_other 0.005 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1218 Nucleic Acid Atoms Solvent Atoms 159 Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement HKL-3000 data scaling PDB_EXTRACT data extraction HKL-3000 data reduction PHASER phasing