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Small molecule stabilizer for ERalpha and 14-3-3 (1075306)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4JC3 4JC3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277 35% (v/v) 2-Ethoxyethanol, 100 mM Imidazole/ Hydrochloric acid pH 8.0, 50 mM Calcium acetate
Crystal Properties Matthews coefficient Solvent content 2.62 53.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.846 α = 90 b = 111.849 β = 90 c = 62.305 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M 2020-11-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE MASSIF-1 1.033200 ESRF MASSIF-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 45.32 99.71 0.997 17.6 4.7 37965
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.657 0.968
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4JC3 1.6 45.32 36144 1852 99.63 0.16878 0.16706 0.1813 0.2013 0.213 RANDOM 17.974
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 -0.1 -0.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.527 r_dihedral_angle_4_deg 13.953 r_long_range_B_other 12.31 r_long_range_B_refined 12.232 r_dihedral_angle_3_deg 11.899 r_scangle_other 11.696 r_scbond_it 11.297 r_scbond_other 11.291 r_mcangle_it 9.415 r_mcangle_other 9.413
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.527 r_dihedral_angle_4_deg 13.953 r_long_range_B_other 12.31 r_long_range_B_refined 12.232 r_dihedral_angle_3_deg 11.899 r_scangle_other 11.696 r_scbond_it 11.297 r_scbond_other 11.291 r_mcangle_it 9.415 r_mcangle_other 9.413 r_mcbond_it 8.073 r_mcbond_other 8.073 r_dihedral_angle_1_deg 4.867 r_angle_refined_deg 1.33 r_angle_other_deg 1.247 r_chiral_restr 0.082 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1898 Nucleic Acid Atoms Solvent Atoms 290 Heterogen Atoms 29
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MOLREP phasing