☰ Navigation Tabs
Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes hexafluoroisopropanol
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 BATCH MODE 298 hexafluoroisopropanol, water
Crystal Properties Matthews coefficient Solvent content 1.97 37.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 9.42 α = 96.565 b = 11.22 β = 89.572 c = 21.12 γ = 94.951
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2022-10-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.979180 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 20.981 85.8 0.174 0.186 0.995 4.88 6.5 2980
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.1 1.16 1.897 2.09 0.627
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING FREE R-VALUE 1.101 20.981 2980 298 85.78 0.19 0.1889 0.2038 0.2038 0.2336 21.652
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.602 0.529 -0.52 3.713 0.969 -1.442
RMS Deviations Key Refinement Restraint Deviation r_rigid_bond_restr 10.582 r_dihedral_angle_3_deg 7.704 r_lrange_other 7.365 r_lrange_it 6.932 r_scangle_other 6.4 r_scangle_it 6.302 r_dihedral_angle_1_deg 5.671 r_scbond_other 5.532 r_scbond_it 5.289 r_angle_refined_deg 1.928
RMS Deviations Key Refinement Restraint Deviation r_rigid_bond_restr 10.582 r_dihedral_angle_3_deg 7.704 r_lrange_other 7.365 r_lrange_it 6.932 r_scangle_other 6.4 r_scangle_it 6.302 r_dihedral_angle_1_deg 5.671 r_scbond_other 5.532 r_scbond_it 5.289 r_angle_refined_deg 1.928 r_mcangle_it 1.917 r_mcangle_other 1.886 r_mcbond_other 1.845 r_mcbond_it 1.81 r_angle_other_deg 1.424 r_symmetry_xyhbond_nbd_refined 0.237 r_symmetry_nbd_other 0.18 r_chiral_restr 0.14 r_nbtor_refined 0.127 r_symmetry_nbtor_other 0.126 r_nbd_refined 0.099 r_nbd_other 0.089 r_symmetry_nbd_refined 0.079 r_xyhbond_nbd_refined 0.05 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 38 Nucleic Acid Atoms Solvent Atoms 2 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement XSCALE data scaling XDS data reduction SHELXD phasing