9FA8
Streptococcal Protein G antibody-binding domain C2 - variant 3
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
2 | 3D HNCA | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
3 | 3D HN(CO)CA | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
4 | 3D HNCACB | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
5 | 3D HN(COCA)CB | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
6 | 3D HNCO | 0.7 mM [U-13C; U-15N] C2 variant 3, 30 mM NA MES, 3 mM NA calcium chloride | 90% H2O/10% D2O | 30 mM | 6 | 1 bar | 293 | Bruker AVANCE 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 850 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | CS-ROSETTA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 3000 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | ANSIG | Kraulis | |
3 | chemical shift assignment | CcpNmr Analysis | CCPN | |
4 | structure calculation | CS-ROSETTA | Shen, Vernon, Baker and Bax | |
5 | refinement | CS-ROSETTA | Shen, Vernon, Baker and Bax |