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Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 4.207 f_angle_d 1.138 f_chiral_restr 0.04 f_bond_d 0.01 f_plane_restr 0.008
Sample Heterodimer of RGA and GID1A/GA3
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 251864 Reported Resolution (Å) 2.66 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 60
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 600 Maximum Defocus (nm) 2700 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.4.0 MODEL REFINEMENT PHENIX 1.20.1_4487: CTF CORRECTION cryoSPARC 4.4.0 RECONSTRUCTION cryoSPARC 4.4.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY 2804928