VDX: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
VDX is a Ligand Of Interest in 1DB1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1DB1_VDX_A_428 | 89% | 4% | 0.063 | 0.949 | 3.14 | 2.36 | 16 | 14 | 0 | 0 | 100% | 1 |
| 7QPP_VDX_A_501 | 96% | 8% | 0.046 | 0.962 | 2.22 | 2.34 | 9 | 14 | 0 | 0 | 100% | 1 |
| 1IE9_VDX_A_500 | 85% | 24% | 0.055 | 0.922 | 1.2 | 1.8 | 2 | 12 | 0 | 1 | 100% | 1 |
| 3M7R_VDX_A_425 | 79% | 4% | 0.074 | 0.921 | 3.22 | 2.46 | 16 | 14 | 0 | 0 | 100% | 1 |
| 3VT7_VDX_A_500 | 96% | 15% | 0.05 | 0.969 | 1.98 | 1.72 | 10 | 10 | 0 | 0 | 100% | 1 |
| 6XZH_VDX_A_4001 | 91% | 4% | 0.074 | 0.966 | 2.68 | 2.86 | 10 | 13 | 2 | 0 | 100% | 1 |
| 6XZJ_VDX_A_501 | 90% | 4% | 0.08 | 0.968 | 2.95 | 2.53 | 11 | 14 | 1 | 0 | 100% | 1 |
| 6XZV_VDX_A_501 | 87% | 5% | 0.075 | 0.953 | 2.96 | 2.31 | 10 | 11 | 4 | 0 | 100% | 1 |
