PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1W8G designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1W8G_PLP_A_1229 | 42% | 46% | 0.165 | 0.883 | 1.06 | 1.02 | 1 | 1 | 1 | 0 | 100% | 0.9375 |
7UB8_PLP_B_302 | 94% | 49% | 0.077 | 0.976 | 1 | 0.98 | 2 | 1 | 1 | 0 | 100% | 0.9375 |
7U9C_PLP_A_301 | 79% | 45% | 0.108 | 0.955 | 1.05 | 1.07 | 1 | - | 0 | 0 | 100% | 0.9375 |
7UAU_PLP_A_301 | 77% | 46% | 0.114 | 0.952 | 1.02 | 1.06 | 1 | - | 1 | 0 | 100% | 0.9375 |
7UAT_PLP_A_301 | 64% | 39% | 0.132 | 0.93 | 1.26 | 1.14 | 3 | 1 | 0 | 0 | 100% | 1 |
7UBP_PLP_A_301 | 53% | 35% | 0.146 | 0.908 | 1.23 | 1.32 | 3 | 3 | 1 | 0 | 100% | 1 |
1EKV_PLP_A_370 | 100% | 19% | 0.019 | 0.998 | 2 | 1.45 | 5 | 4 | 1 | 0 | 94% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |