SPM: SPERMINE

SPM is a Ligand Of Interest in 1XL6 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XL6_SPM_B_3001Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XL6_SPM_B_3001Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1XL6_SPM_B_3001Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1XL6_SPM_B_3001 0% 66% 0.59 0.499 0.88 0.45 - -00100%0.657
2WLJ_SPM_A_1303 39% 71% 0.232 0.9410.38 0.74 - -20100%1
2WLK_SPM_B_1302 3% 62% 0.452 0.7740.54 0.9 - 150100%0.5
8OEX_SPM_A_101 96% 74% 0.072 0.9820.48 0.54 - -00100%1
6E1X_SPM_C_201 93% 57% 0.061 0.9560.57 1.05 - -20100%1
4MJ8_SPM_A_201 84% 64% 0.098 0.960.41 0.97 - -00100%1
4MI4_SPM_A_201 84% 61% 0.096 0.9570.73 0.76 - -00100%1
3P4J_SPM_A_20 82% 75% 0.117 0.9740.34 0.63 - -10100%1