U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 1XTT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1XTT_U5P_D_4250 | 92% | 21% | 0.077 | 0.968 | 1.94 | 1.41 | 7 | 4 | 0 | 0 | 100% | 1 |
1XTT_U5P_A_1250 | 91% | 12% | 0.085 | 0.973 | 2.38 | 1.71 | 5 | 8 | 0 | 0 | 100% | 1 |
1XTT_U5P_B_2250 | 91% | 21% | 0.081 | 0.966 | 1.93 | 1.39 | 5 | 4 | 0 | 0 | 100% | 1 |
1XTT_U5P_C_3250 | 88% | 12% | 0.091 | 0.968 | 2.39 | 1.69 | 5 | 8 | 0 | 0 | 100% | 1 |
1XTV_U5P_A_1250 | 75% | 13% | 0.134 | 0.969 | 2.35 | 1.61 | 7 | 8 | 0 | 0 | 100% | 1 |
1XTU_U5P_G_7250 | 53% | 19% | 0.195 | 0.958 | 1.97 | 1.47 | 5 | 6 | 2 | 0 | 100% | 1 |
3G1X_U5P_A_229 | 100% | 48% | 0.021 | 0.996 | 1.08 | 0.92 | 1 | 2 | 0 | 0 | 100% | 1 |
6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |
6ZWY_U5P_A_501 | 100% | 44% | 0.048 | 0.994 | 0.99 | 1.17 | 1 | 1 | 0 | 0 | 100% | 1 |
3G22_U5P_B_229 | 99% | 49% | 0.042 | 0.98 | 1.08 | 0.91 | 2 | 2 | 0 | 0 | 100% | 1 |