2V4Z | pdb_00002v4z


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2V4Z designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2V4Z_GDP_A_1348Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2V4Z_GDP_A_1348Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2V4Z_GDP_A_1348Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2V4Z_GDP_A_1348 66% 47% 0.18 0.9870.93 1.11 1 400100%1
2ODE_GDP_C_1002 97% 45% 0.064 0.9791.12 0.99 2 200100%1
2IHB_GDP_A_356 93% 49% 0.092 0.9880.88 1.1 1 400100%1
4G5O_GDP_C_401 79% 44% 0.141 0.9890.98 1.18 2 210100%1
4G5S_GDP_C_401 60% 48% 0.179 0.9670.94 1.08 1 120100%1
4G5R_GDP_A_401 55% 43% 0.204 0.9730.89 1.31 1 420100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1