CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
CAP is a Ligand Of Interest in 2VDH designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2VDH_CAP_H_1477 | 94% | 50% | 0.046 | 0.984 | 0.96 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_F_1477 | 92% | 43% | 0.051 | 0.981 | 0.91 | 1.19 | 1 | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_C_1477 | 91% | 47% | 0.053 | 0.98 | 0.89 | 1.05 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_G_1477 | 90% | 46% | 0.057 | 0.981 | 0.99 | 1 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_B_1477 | 89% | 43% | 0.059 | 0.981 | 1.06 | 1.08 | 1 | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_D_1477 | 89% | 48% | 0.056 | 0.975 | 0.9 | 1 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_E_1477 | 88% | 48% | 0.057 | 0.975 | 0.92 | 0.98 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_A_1477 | 86% | 49% | 0.061 | 0.973 | 0.93 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 1UW9_CAP_O_1476 | 98% | 27% | 0.032 | 0.991 | 1.64 | 1.33 | 2 | 3 | 0 | 0 | 100% | 1 |
| 1UZH_CAP_O_477 | 98% | 37% | 0.036 | 0.992 | 1.22 | 1.23 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2V6A_CAP_B_1477 | 97% | 48% | 0.037 | 0.989 | 0.96 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
| 1GK8_CAP_E_1477 | 97% | 29% | 0.037 | 0.989 | 1.28 | 1.58 | 3 | 3 | 0 | 0 | 100% | 1 |
| 1IR2_CAP_D_501 | 97% | 25% | 0.036 | 0.987 | 1.55 | 1.5 | 3 | 2 | 0 | 0 | 100% | 1 |
| 5IU0_CAP_A_502 | 100% | 45% | 0.011 | 0.999 | 0.94 | 1.1 | - | 1 | 0 | 0 | 100% | 1 |
| 5MZ2_CAP_B_902 | 100% | 42% | 0.013 | 0.998 | 0.84 | 1.32 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1BWV_CAP_A_491 | 100% | 36% | 0.014 | 0.998 | 1.05 | 1.43 | - | 4 | 1 | 0 | 100% | 1 |
| 5N9Z_CAP_G_502 | 100% | 42% | 0.015 | 0.998 | 0.9 | 1.26 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5OYA_CAP_C_502 | 100% | 48% | 0.017 | 0.998 | 0.92 | 1 | - | 1 | 0 | 0 | 100% | 1 |
