2XTM


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2XTM designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2XTM_GDP_A_1228Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2XTM_GDP_A_1228Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2XTM_GDP_A_1228Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2XTM_GDP_A_1228 99% 51% 0.054 0.990.86 1.02 1 200100%1
2XTM_GDP_B_1227 58% 29% 0.133 0.9111.62 1.24 7 300100%1
2XTO_GDP_A_1256 76% 47% 0.134 0.9710.91 1.12 1 310100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1