3BFK


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 3BFK designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3BFK_GDP_B_200Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3BFK_GDP_B_200Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3BFK_GDP_B_200 93% 50% 0.081 0.9760.99 0.93 1 200100%1
3BFK_GDP_C_200 93% 55% 0.08 0.9750.82 0.92 - 200100%1
3BFK_GDP_D_200 82% 46% 0.094 0.951.11 0.99 3 100100%1
3BFK_GDP_E_200 81% 49% 0.097 0.9480.95 1.03 - 200100%1
3BFK_GDP_A_200 78% 45% 0.101 0.9431.03 1.08 1 300100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1