UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3EIC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3EIC_UDP_D_164 | 88% | 35% | 0.092 | 0.967 | 0.88 | 1.65 | 1 | 6 | 0 | 0 | 100% | 1 |
3EIC_UDP_E_165 | 86% | 39% | 0.091 | 0.961 | 0.9 | 1.45 | - | 5 | 0 | 0 | 100% | 1 |
3EIC_UDP_A_161 | 84% | 35% | 0.098 | 0.96 | 0.89 | 1.66 | - | 5 | 1 | 0 | 100% | 1 |
3EIC_UDP_C_163 | 80% | 38% | 0.101 | 0.949 | 0.85 | 1.56 | 1 | 5 | 0 | 0 | 100% | 1 |
3EIC_UDP_B_162 | 78% | 40% | 0.119 | 0.961 | 0.88 | 1.43 | - | 4 | 1 | 0 | 100% | 1 |
3EIC_UDP_F_166 | 59% | 37% | 0.146 | 0.929 | 0.92 | 1.52 | 1 | 5 | 0 | 0 | 100% | 1 |
3FCW_UDP_D_138 | 78% | 35% | 0.124 | 0.968 | 0.92 | 1.61 | - | 6 | 1 | 0 | 100% | 1 |
3FBB_UDP_D_201 | 75% | 38% | 0.12 | 0.952 | 0.89 | 1.54 | - | 5 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
6GX2_UDP_A_402 | 99% | 52% | 0.053 | 0.989 | 0.86 | 1.01 | - | 2 | 0 | 0 | 100% | 1 |