UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3FBB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3FBB_UDP_D_201 | 83% | 29% | 0.077 | 0.938 | 1.14 | 1.58 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3FBB_UDP_E_201 | 82% | 29% | 0.076 | 0.935 | 1.14 | 1.57 | 2 | 6 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_A_201 | 77% | 27% | 0.082 | 0.924 | 1.12 | 1.69 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_C_201 | 74% | 33% | 0.09 | 0.923 | 1.06 | 1.5 | 1 | 6 | 1 | 0 | 100% | 1 |
| 3FBB_UDP_F_201 | 58% | 27% | 0.101 | 0.877 | 1.18 | 1.63 | 2 | 6 | 0 | 0 | 100% | 1 |
| 3FBB_UDP_B_201 | 57% | 29% | 0.107 | 0.879 | 1.1 | 1.64 | 1 | 4 | 2 | 0 | 100% | 1 |
| 3EIC_UDP_E_165 | 100% | 32% | 0.032 | 0.99 | 1.08 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3FCW_UDP_A_138 | 86% | 32% | 0.078 | 0.951 | 1 | 1.6 | - | 5 | 3 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
