GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3FBE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3FBE_GDP_A_138 | 11% | 42% | 0.308 | 0.829 | 0.89 | 1.33 | - | 5 | 2 | 0 | 100% | 1 |
3FBE_GDP_C_138 | 8% | 44% | 0.308 | 0.792 | 0.89 | 1.26 | - | 3 | 1 | 0 | 100% | 1 |
3FBE_GDP_D_138 | 7% | 44% | 0.313 | 0.777 | 0.94 | 1.21 | - | 3 | 2 | 0 | 100% | 1 |
3FBE_GDP_E_138 | 5% | 44% | 0.365 | 0.779 | 0.86 | 1.28 | - | 4 | 4 | 0 | 100% | 1 |
3FBE_GDP_F_138 | 5% | 44% | 0.348 | 0.756 | 0.88 | 1.29 | - | 5 | 2 | 0 | 100% | 1 |
3FBE_GDP_B_138 | 0% | 43% | 0.496 | 0.44 | 0.97 | 1.23 | 2 | 5 | 6 | 0 | 100% | 1 |
3GP9_GDP_B_138 | 25% | 42% | 0.202 | 0.84 | 0.92 | 1.3 | 1 | 4 | 0 | 0 | 100% | 0.64 |
1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
6TAN_GDP_A_201 | 100% | 55% | 0.046 | 0.99 | 0.88 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |