UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3HE3 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3HE3_UDP_C_400 97% 33% 0.048 0.9751 1.55 - 600100%1
3HE3_UDP_I_400 96% 31% 0.052 0.9711.01 1.6 1 700100%1
3HE3_UDP_G_400 96% 32% 0.054 0.9711.01 1.58 1 700100%1
3HE3_UDP_A_400 96% 34% 0.058 0.9750.98 1.52 - 620100%1
3HE3_UDP_H_400 95% 32% 0.058 0.971.02 1.56 1 600100%1
3HE3_UDP_E_400 95% 34% 0.06 0.9720.99 1.51 - 510100%1
3HE3_UDP_F_400 95% 31% 0.057 0.9671 1.61 1 600100%1
3HE3_UDP_B_400 95% 31% 0.059 0.9681.03 1.6 2 500100%1
3HE3_UDP_J_400 94% 32% 0.061 0.9651 1.59 - 600100%1
3HE3_UDP_D_400 93% 31% 0.064 0.9661.03 1.59 1 600100%1
3MJ4_UDP_A_500 82% 26% 0.086 0.9441.07 1.78 2 810100%1
5F87_UDP_A_501 100% 29% 0.013 0.9991.18 1.54 2 420100%1
5V0T_UDP_B_501 100% 69% 0.014 0.9990.43 0.61 - 100100%1
7FGA_UDP_D_401 100% 2% 0.014 0.9993.6 2.79 15 1220100%1
8X3Q_UDP_D_401 100% 3% 0.013 0.9993.5 2.77 14 1400100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.51 2.73 14 1220100%1