PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 3L6B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3L6B_PLP_A_350 | 57% | 45% | 0.203 | 0.98 | 0.84 | 1.28 | - | 2 | 0 | 0 | 100% | 0.9375 |
7NBF_PLP_BBB_401 | 99% | 56% | 0.06 | 0.987 | 0.78 | 0.9 | 1 | 1 | 0 | 0 | 100% | 0.9375 |
7NBG_PLP_BBB_401 | 98% | 56% | 0.061 | 0.986 | 0.75 | 0.96 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
7NBC_PLP_DDD_401 | 98% | 55% | 0.067 | 0.986 | 0.71 | 1.01 | 1 | 1 | 0 | 0 | 100% | 0.9375 |
7NBD_PLP_BBB_401 | 97% | 59% | 0.074 | 0.989 | 0.78 | 0.78 | 1 | - | 0 | 0 | 100% | 0.9375 |
5X2L_PLP_A_401 | 87% | 52% | 0.102 | 0.974 | 1.01 | 0.87 | - | - | 1 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |