TRD: TRIDECANE
TRD is a Ligand Of Interest in 3OMN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3OMN_TRD_A_1009 | 20% | 89% | 0.152 | 0.836 | 0.26 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
3OMN_TRD_D_14 | 18% | 90% | 0.136 | 0.8 | 0.25 | 0.37 | - | - | 0 | 0 | 54% | 0.5385 |
3OMN_TRD_C_552 | 14% | 82% | 0.19 | 0.744 | 0.23 | 0.56 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_A_3 | 14% | 82% | 0.284 | 0.841 | 0.28 | 0.51 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_D_3 | 14% | 80% | 0.287 | 0.843 | 0.18 | 0.66 | - | - | 0 | 0 | 100% | 1 |
3OMN_TRD_A_553 | 13% | 84% | 0.254 | 0.797 | 0.23 | 0.52 | - | - | 1 | 0 | 100% | 1 |
3OMN_TRD_B_4 | 9% | 88% | 0.3 | 0.865 | 0.25 | 0.41 | - | - | 0 | 0 | 62% | 0.6154 |
3OMN_TRD_A_552 | 8% | 88% | 0.184 | 0.752 | 0.33 | 0.33 | - | - | 0 | 0 | 46% | 0.4615 |
3OMN_TRD_A_1013 | 3% | 86% | 0.254 | 0.681 | 0.25 | 0.47 | - | - | 0 | 0 | 54% | 0.5385 |
6PW1_TRD_C_601 | 71% | 72% | 0.099 | 0.918 | 0.15 | 0.92 | - | - | 1 | 0 | 100% | 1 |
3DTU_TRD_A_1506 | 52% | 84% | 0.151 | 0.91 | 0.24 | 0.52 | - | - | 3 | 0 | 100% | 1 |
6PW0_TRD_D_302 | 43% | 73% | 0.196 | 0.921 | 0.12 | 0.9 | - | - | 0 | 0 | 100% | 1 |
3FYE_TRD_D_1007 | 29% | 81% | 0.221 | 0.881 | 0.23 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3FYI_TRD_A_578 | 28% | 82% | 0.245 | 0.9 | 0.28 | 0.52 | - | - | 0 | 0 | 100% | 1 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |
6LPJ_TRD_A_2422 | 38% | 98% | 0.154 | 0.855 | 0.13 | 0.16 | - | - | 0 | 0 | 100% | 1 |