XP4: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE
XP4 is a Ligand Of Interest in 3UX4 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3UX4_XP4_B_302 | 14% | 21% | 0.292 | 0.849 | 1.38 | 1.95 | 2 | 11 | 15 | 0 | 100% | 1 |
3UX4_XP4_C_301 | 11% | 13% | 0.333 | 0.853 | 1.43 | 2.51 | 3 | 10 | 2 | 0 | 100% | 1 |
3UX4_XP4_B_301 | 3% | 23% | 0.394 | 0.755 | 1.24 | 1.94 | 2 | 6 | 9 | 0 | 90% | 0.9 |
3UX4_XP4_C_302 | 3% | 28% | 0.381 | 0.854 | 1.67 | 1.21 | 1 | 1 | 0 | 0 | 25% | 0.25 |
3UX4_XP4_B_305 | 2% | 25% | 0.392 | 0.84 | 1.93 | 1.15 | 1 | 1 | 0 | 0 | 25% | 0.25 |
3UX4_XP4_B_303 | 2% | 25% | 0.387 | 0.738 | 1.54 | 1.53 | 1 | 3 | 3 | 0 | 45% | 0.45 |
3UX4_XP4_A_202 | 2% | 21% | 0.509 | 0.89 | 1.77 | 1.57 | 1 | 1 | 0 | 0 | 25% | 0.25 |
3UX4_XP4_B_304 | 1% | 31% | 0.396 | 0.717 | 1.35 | 1.38 | 1 | 2 | 5 | 0 | 43% | 0.425 |
3UX4_XP4_A_201 | 1% | 33% | 0.451 | 0.688 | 1.38 | 1.27 | 1 | 1 | 1 | 0 | 43% | 0.425 |
6WM5_XP4_A_330 | 53% | 43% | 0.146 | 0.908 | 1.02 | 1.18 | 2 | 3 | 1 | 0 | 100% | 1 |
4ZXI_XP4_A_1404 | 44% | 41% | 0.196 | 0.923 | 1.13 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
6T1Z_XP4_A_502 | 22% | 69% | 0.209 | 0.862 | 0.36 | 0.83 | - | 2 | 2 | 0 | 80% | 0.8 |
8ELF_XP4_B_503 | 3% | 32% | 0.346 | 0.668 | 1.52 | 1.18 | 6 | 2 | 1 | 0 | 100% | 1 |