ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 3VET designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VET_ADP_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VET_ADP_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VET_ADP_A_601Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3VET_ADP_A_601 89% 40% 0.096 0.9750.96 1.37 1 510100%1
3VET_ADP_A_603 81% 45% 0.139 0.9910.85 1.26 1 300100%1
3VF2_ADP_A_604 90% 41% 0.1 0.9840.94 1.34 2 500100%1
3VEZ_ADP_A_603 89% 41% 0.093 0.9710.95 1.32 2 300100%1
3VEW_ADP_A_601 84% 39% 0.114 0.9750.93 1.43 1 430100%1
3VF4_ADP_A_603 54% 41% 0.17 0.9340.92 1.38 2 330100%0.74
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1
1PHP_ADP_A_396 100% 24% 0.026 0.9951.29 1.8 3 1110100%1