NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3VI3 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VI3_NAG_B_2004Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VI3_NAG_B_2004Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VI3_NAG_B_2004Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3VI3_NAG_B_2004 83% 55% 0.078 0.9340.54 1.2 - 100100%1
3VI3_NAG_A_2005 71% 61% 0.08 0.90.56 0.94 - -00100%1
3VI3_NAG_C_2009 64% 59% 0.091 0.8880.61 0.95 - -00100%1
3VI3_NAG_A_2008 60% 40% 0.095 0.880.37 1.91 - 230100%1
3VI3_NAG_D_2004 49% 57% 0.099 0.8420.48 1.16 - 100100%1
3VI3_NAG_C_2008 42% 56% 0.131 0.8470.53 1.16 - 100100%1
3VI3_NAG_C_2016 35% 54% 0.12 0.8080.44 1.3 - 100100%1
3VI3_NAG_A_2006 35% 62% 0.11 0.7970.49 0.97 - 100100%1
3VI3_NAG_A_2007 34% 63% 0.138 0.8210.46 0.96 - -00100%1
3VI3_NAG_C_2007 22% 59% 0.13 0.7440.51 1.04 - 100100%1
3VI3_NAG_A_2015 20% 41% 0.141 0.7390.44 1.83 - 100100%1
3VI4_NAG_B_503 84% 58% 0.072 0.9320.58 1 - 100100%1
7CEB_NAG_B_1004 59% 76% 0.165 0.9460.37 0.57 - -00100%1
4WK2_NAG_A_520 29% 77% 0.223 0.8820.29 0.61 - -00100%1
8W30_NAG_B_504 24% 75% 0.139 0.7650.48 0.49 - -00100%1
4WJK_NAG_B_512 14% 57% 0.197 0.7431.02 0.65 1 -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1