GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4DCT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4DCT_GDP_A_501 | 70% | 39% | 0.115 | 0.936 | 0.92 | 1.35 | - | 6 | 2 | 0 | 100% | 1 |
| 4DCT_GDP_A_502 | 7% | 39% | 0.395 | 0.88 | 0.93 | 1.35 | 1 | 4 | 10 | 0 | 100% | 0.5 |
| 5X4B_GDP_B_201 | 99% | 15% | 0.051 | 0.99 | 1.25 | 2.35 | 2 | 6 | 0 | 0 | 100% | 1 |
| 4DCS_GDP_A_501 | 85% | 43% | 0.09 | 0.96 | 0.99 | 1.1 | 2 | 3 | 0 | 0 | 100% | 1 |
| 4DCU_GDP_A_501 | 83% | 43% | 0.111 | 0.975 | 0.94 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2HJG_GDP_A_500 | 78% | 47% | 0.083 | 0.929 | 0.98 | 0.95 | 1 | 2 | 1 | 0 | 100% | 1 |
| 5MBS_GDP_A_501 | 44% | 39% | 0.206 | 0.938 | 0.99 | 1.3 | 1 | 3 | 0 | 0 | 100% | 0.804 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
