PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 4L3V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4L3V_PLP_C_601 | 49% | 33% | 0.196 | 0.942 | 1.14 | 1.5 | 1 | 2 | 4 | 0 | 100% | 0.9375 |
4L3V_PLP_B_601 | 32% | 34% | 0.234 | 0.909 | 1.11 | 1.49 | 1 | 2 | 4 | 0 | 100% | 0.9375 |
4L3V_PLP_A_601 | 27% | 32% | 0.259 | 0.91 | 1.17 | 1.52 | 1 | 3 | 4 | 0 | 100% | 0.9375 |
4COO_PLP_B_1543 | 81% | 7% | 0.127 | 0.979 | 2.37 | 2.47 | 4 | 11 | 3 | 0 | 100% | 0.9375 |
7QGT_PLP_A_1001 | 59% | 65% | 0.199 | 0.983 | 0.58 | 0.77 | - | - | 0 | 0 | 100% | 0.9375 |
4L28_PLP_D_601 | 51% | 5% | 0.204 | 0.96 | 3.42 | 1.99 | 7 | 5 | 2 | 0 | 100% | 0.9375 |
4L27_PLP_D_601 | 42% | 39% | 0.243 | 0.965 | 1.26 | 1.11 | 1 | 1 | 3 | 0 | 100% | 0.9375 |
4L0D_PLP_A_601 | 40% | 42% | 0.206 | 0.918 | 1.03 | 1.23 | 1 | 2 | 3 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |