GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4M0L designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4M0L_GDP_D_501 93% 25% 0.062 0.9631.2 1.73 4 600100%0.74
4M0L_GDP_B_501 91% 26% 0.066 0.961.16 1.73 3 620100%0.73
4M0L_GDP_C_501 89% 25% 0.076 0.9631.18 1.77 3 610100%0.76
4M0L_GDP_A_501 89% 24% 0.072 0.9581.18 1.81 3 730100%0.76
4M0L_GDP_F_501 80% 25% 0.083 0.9361.17 1.79 3 600100%0.79
4M0L_GDP_E_501 78% 25% 0.084 0.9281.16 1.76 3 540100%0.78
3PEN_GDP_A_416 100% 27% 0.032 0.9941.14 1.68 3 620100%1
4RD0_GDP_A_501 100% 26% 0.034 0.991.09 1.8 2 800100%1
6I5M_GDP_A_501 99% 28% 0.038 0.991.05 1.74 4 700100%1
4RD6_GDP_A_501 99% 28% 0.04 0.9861.12 1.63 4 600100%1
4RD3_GDP_A_502 98% 25% 0.049 0.9831.21 1.72 4 700100%1
1TVK_GDP_B_1500 100% 32% 0.012 0.9991.95 0.71 1 180100%1
2CNW_GDP_A_1001 100% 24% 0.014 0.9981.16 1.84 3 900100%1
3ZY3_GDP_A_1384 100% 26% 0.014 0.9981.13 1.74 3 810100%1
5V9L_GDP_A_201 100% 35% 0.014 0.9981.01 1.42 1 500100%1
6EG8_GDP_K_401 100% 25% 0.015 0.9991.16 1.76 3 700100%1