NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4M40 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4M40_NAG_C_403Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4M40_NAG_C_403Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4M40_NAG_C_403Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4M40_NAG_C_403 99% 69% 0.037 0.9750.6 0.59 1 -00100%1
4M40_NAG_A_403 99% 72% 0.041 0.9780.4 0.66 - 100100%1
4M40_NAG_A_409 98% 73% 0.047 0.9660.5 0.56 - -00100%1
4M40_NAG_E_403 96% 20% 0.058 0.9661.29 2.06 1 120100%1
4M40_NAG_A_406 96% 81% 0.052 0.9590.28 0.53 - -00100%1
4M40_NAG_C_404 95% 64% 0.052 0.9540.27 1.07 - 100100%1
4M40_NAG_D_201 95% 88% 0.059 0.9610.19 0.48 - -00100%1
4M40_NAG_F_201 91% 88% 0.059 0.9460.17 0.48 - -00100%1
4M40_NAG_C_409 91% 84% 0.054 0.9380.27 0.48 - -00100%1
4M40_NAG_E_404 82% 54% 0.083 0.9360.69 1.06 1 100100%1
4M40_NAG_E_409 68% 70% 0.075 0.8850.25 0.88 - 100100%1
4M40_NAG_B_201 57% 77% 0.102 0.8760.25 0.66 - -00100%1
4M44_NAG_A_403 100% 75% 0.035 0.9890.46 0.53 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1