4MD2
L2P: 2,3-DI-PHYTANYL-GLYCEROL
L2P is a Ligand Of Interest in 4MD2 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4MD2_L2P_A_1016 | 31% | 83% | 0.097 | 0.922 | 0.32 | 0.45 | - | - | 0 | 0 | 11% | 10.870000000000001 |
4MD2_L2P_A_1001 | 28% | 74% | 0.107 | 0.904 | 0.28 | 0.71 | - | - | 0 | 0 | 17% | 17.39 |
4MD2_L2P_A_1003 | 26% | 69% | 0.116 | 0.9 | 0.3 | 0.89 | - | - | 0 | 0 | 20% | 19.57 |
4MD2_L2P_A_1013 | 22% | 68% | 0.121 | 0.877 | 0.23 | 1 | - | 1 | 0 | 0 | 22% | 0.2174 |
4MD2_L2P_A_1007 | 21% | 85% | 0.113 | 0.878 | 0.34 | 0.39 | - | - | 0 | 0 | 11% | 10.870000000000001 |
4MD2_L2P_A_1008 | 21% | 79% | 0.136 | 0.893 | 0.29 | 0.56 | - | - | 0 | 0 | 15% | 15.22 |
4MD2_L2P_A_1009 | 20% | 58% | 0.135 | 0.885 | 0.5 | 1.11 | - | - | 1 | 0 | 15% | 15.22 |
4MD2_L2P_A_1010 | 19% | 55% | 0.134 | 0.865 | 0.21 | 1.5 | - | 2 | 1 | 0 | 22% | 0.2174 |
4MD2_L2P_A_1014 | 19% | 61% | 0.13 | 0.88 | 0.52 | 0.97 | - | - | 0 | 0 | 11% | 10.870000000000001 |
4MD2_L2P_A_1006 | 17% | 71% | 0.143 | 0.86 | 0.29 | 0.8 | - | - | 0 | 0 | 22% | 0.2174 |
4MD2_L2P_A_1018 | 13% | 62% | 0.111 | 0.801 | 0.46 | 0.98 | - | - | 3 | 0 | 15% | 15.22 |
4MD2_L2P_A_1017 | 13% | 65% | 0.143 | 0.84 | 0.24 | 1.08 | - | - | 2 | 0 | 11% | 10.870000000000001 |
4MD2_L2P_A_1015 | 12% | 85% | 0.127 | 0.813 | 0.32 | 0.41 | - | - | 0 | 0 | 11% | 10.870000000000001 |
4MD2_L2P_A_1004 | 9% | 73% | 0.129 | 0.763 | 0.52 | 0.54 | - | - | 0 | 0 | 20% | 19.57 |
4MD2_L2P_A_1011 | 9% | 60% | 0.164 | 0.782 | 0.38 | 1.12 | - | 1 | 1 | 0 | 24% | 0.2391 |
4MD2_L2P_A_1005 | 8% | 67% | 0.158 | 0.776 | 0.32 | 0.95 | - | - | 0 | 0 | 17% | 17.39 |
4MD2_L2P_A_1019 | 7% | 54% | 0.242 | 0.795 | 0.5 | 1.27 | - | 3 | 5 | 0 | 41% | 0.413 |
4MD2_L2P_A_1012 | 6% | 52% | 0.158 | 0.709 | 0.69 | 1.16 | - | 1 | 4 | 0 | 26% | 0.2609 |
6GA3_L2P_A_311 | 55% | 60% | 0.157 | 0.926 | 0.65 | 0.87 | - | 2 | 0 | 0 | 100% | 1 |
7XJE_L2P_A_303 | 51% | 40% | 0.13 | 0.905 | 0.64 | 1.69 | - | 7 | 2 | 1 | 87% | 0.8696 |
6GAE_L2P_A_302 | 42% | 61% | 0.11 | 0.908 | 0.64 | 0.86 | - | - | 2 | 0 | 54% | 0.5435 |
6GAA_L2P_A_302 | 41% | 61% | 0.113 | 0.909 | 0.64 | 0.86 | - | - | 3 | 0 | 54% | 0.5435 |
6GAB_L2P_A_302 | 41% | 61% | 0.115 | 0.911 | 0.64 | 0.86 | - | - | 2 | 0 | 54% | 0.5435 |