PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 4WYC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4WYC_PLP_B_501 | 91% | 9% | 0.085 | 0.97 | 2.83 | 1.6 | 3 | 4 | 1 | 0 | 100% | 0.9375 |
4WYC_PLP_A_501 | 88% | 10% | 0.092 | 0.966 | 2.81 | 1.61 | 3 | 5 | 1 | 0 | 100% | 0.9375 |
4WYD_PLP_A_501 | 99% | 13% | 0.058 | 0.985 | 2.69 | 1.34 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
4XJP_PLP_B_501 | 97% | 9% | 0.062 | 0.979 | 2.59 | 1.88 | 3 | 6 | 1 | 0 | 100% | 0.9375 |
4WYG_PLP_A_501 | 96% | 10% | 0.072 | 0.98 | 2.79 | 1.57 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
4XJO_PLP_A_501 | 95% | 10% | 0.073 | 0.976 | 2.77 | 1.56 | 3 | 5 | 5 | 0 | 100% | 0.9375 |
3LV2_PLP_B_502 | 94% | 38% | 0.084 | 0.982 | 1.06 | 1.37 | 2 | 3 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |