UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4ZHT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4ZHT_UDP_C_501 | 99% | 27% | 0.049 | 0.979 | 1.2 | 1.72 | 3 | 6 | 0 | 0 | 100% | 1 |
4ZHT_UDP_B_501 | 98% | 31% | 0.052 | 0.97 | 1.17 | 1.55 | 3 | 6 | 0 | 0 | 100% | 1 |
4ZHT_UDP_A_501 | 97% | 29% | 0.054 | 0.971 | 1.11 | 1.69 | 2 | 5 | 0 | 0 | 100% | 1 |
4ZHT_UDP_D_501 | 91% | 32% | 0.066 | 0.95 | 1.12 | 1.57 | 3 | 5 | 0 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |