YGP: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine
YGP is a Ligand Of Interest in 5D4V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5D4V_YGP_C_308 | 34% | 5% | 0.161 | 0.844 | 3.2 | 2.07 | 13 | 16 | 2 | 0 | 100% | 1 |
| 5D4V_YGP_B_307 | 31% | 5% | 0.15 | 0.817 | 3.09 | 2.26 | 13 | 18 | 4 | 0 | 100% | 1 |
| 3WB2_YGP_A_201 | 99% | 13% | 0.04 | 0.983 | 1.75 | 2.06 | 9 | 16 | 0 | 0 | 100% | 1 |
