5EJ8


TD6: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid

TD6 is a Ligand Of Interest in 5EJ8 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5EJ8_TD6_C_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5EJ8_TD6_C_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5EJ8_TD6_C_602 99% 15% 0.058 0.9911.92 1.87 5 950100%1
5EJ8_TD6_H_602 99% 24% 0.057 0.9891.49 1.63 4 760100%1
5EJ8_TD6_G_601 99% 15% 0.06 0.9871.89 1.9 5 960100%1
5EJ8_TD6_F_602 99% 12% 0.062 0.9892.19 1.86 5 950100%1
5EJ8_TD6_A_601 98% 18% 0.067 0.9891.88 1.66 5 840100%1
5EJ8_TD6_D_602 98% 13% 0.063 0.9842.25 1.74 4 740100%1
5EJ8_TD6_E_601 98% 16% 0.067 0.9882.01 1.72 5 850100%1
5EJ8_TD6_B_602 97% 12% 0.07 0.9842.41 1.71 4 1140100%1
5EJ7_TD6_F_601 97% 11% 0.065 0.982.5 1.67 5 790100%1
5EJ6_TD6_H_601 96% 7% 0.07 0.982.99 1.85 5 890100%1
5EJ4_TD6_B_602 95% 8% 0.075 0.982.79 1.8 5 1050100%1
5Z2P_TD6_F_601 90% 3% 0.095 0.9763.93 2.06 13 1590100%0.957
5EJA_TD6_F_601 84% 7% 0.098 0.9612.83 2.05 5 950100%1