UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5HVM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5HVM_UDP_A_601 | 58% | 6% | 0.16 | 0.94 | 3.48 | 1.62 | 11 | 4 | 0 | 0 | 100% | 1 |
| 5HVM_UDP_B_601 | 42% | 6% | 0.23 | 0.95 | 3.43 | 1.8 | 9 | 6 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_A_401 | 100% | 3% | 0.021 | 0.996 | 3.31 | 2.67 | 13 | 13 | 1 | 0 | 100% | 1 |
| 8X3U_UDP_C_401 | 100% | 3% | 0.013 | 0.999 | 3.28 | 2.68 | 13 | 12 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 61% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
