PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 5LUC designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5LUC_PLP_T_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5LUC_PLP_T_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5LUC_PLP_T_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5LUC_PLP_T_401 97% 7% 0.068 0.9862.28 2.6 5 800100%1
5LUC_PLP_S_401 96% 3% 0.074 0.9842.06 4.09 2 800100%1
5LUC_PLP_E_401 96% 6% 0.073 0.9812.59 2.36 8 410100%1
5LUC_PLP_M_401 96% 6% 0.075 0.9822.83 2.28 5 720100%1
5LUC_PLP_N_401 95% 8% 0.077 0.982.4 2.31 8 400100%1
5LUC_PLP_B_401 94% 8% 0.083 0.9832.5 2.08 7 610100%1
5LUC_PLP_G_401 94% 7% 0.085 0.9842.37 2.36 9 610100%1
5LUC_PLP_A_401 94% 7% 0.08 0.9772.44 2.34 5 520100%1
5F9S_PLP_B_401 89% 14% 0.099 0.9772.25 1.64 5 210100%1
5OG0_PLP_A_401 76% 2% 0.135 0.9733.81 2.67 3 720100%1
4CBR_PLP_A_1389 74% 8% 0.145 0.9753.05 1.6 3 640100%1
1H0C_PLP_A_1391 73% 4% 0.126 0.9524.55 1.13 7 210100%1
2YOB_PLP_A_1389 71% 29% 0.149 0.9690.98 1.85 1 410100%1
2BIE_PLP_A_1361 100% 38% 0.024 0.9961.23 1.19 1 310100%1
2X3L_PLP_A_1211 100% 19% 0.024 0.9951.74 1.73 2 210100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1