NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5M8R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5M8R_NAG_D_504 | 65% | 76% | 0.094 | 0.894 | 0.3 | 0.65 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_505 | 63% | 64% | 0.094 | 0.889 | 0.6 | 0.76 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_C_513 | 48% | 53% | 0.117 | 0.859 | 1.1 | 0.74 | 1 | 1 | 2 | 0 | 100% | 0.9333 |
5M8R_NAG_A_507 | 48% | 62% | 0.12 | 0.862 | 0.69 | 0.76 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_D_506 | 41% | 70% | 0.124 | 0.836 | 0.32 | 0.82 | - | 1 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_B_511 | 37% | 70% | 0.138 | 0.835 | 0.51 | 0.65 | - | 1 | 2 | 0 | 100% | 0.9333 |
5M8R_NAG_D_505 | 31% | 68% | 0.147 | 0.812 | 0.62 | 0.61 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_506 | 15% | 71% | 0.148 | 0.707 | 0.57 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_B_504 | 12% | 27% | 0.171 | 0.694 | 1.67 | 1.3 | 3 | 2 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_A_504 | 10% | 30% | 0.192 | 0.696 | 1.35 | 1.42 | 2 | 2 | 0 | 0 | 100% | 0.9333 |
5M8R_NAG_D_503 | 5% | 39% | 0.201 | 0.611 | 1.25 | 1.12 | 2 | 2 | 0 | 0 | 100% | 0.9333 |
5M8Q_NAG_B_504 | 48% | 54% | 0.124 | 0.878 | 1.19 | 0.62 | 1 | - | 2 | 0 | 93% | 0.9333 |
5M8T_NAG_A_508 | 42% | 70% | 0.123 | 0.841 | 0.56 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
5M8L_NAG_C_511 | 42% | 67% | 0.159 | 0.877 | 0.48 | 0.79 | - | 1 | 0 | 0 | 100% | 0.9333 |
5M8S_NAG_C_509 | 32% | 48% | 0.136 | 0.806 | 0.93 | 1.06 | 1 | 1 | 1 | 0 | 100% | 0.9333 |
5M8N_NAG_C_513 | 26% | 58% | 0.144 | 0.781 | 0.51 | 1.09 | - | 2 | 1 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |