Ligand validation:5MDO

C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

C8E is a Ligand Of Interest in 5MDO designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5MDO_C8E_F_404	59%	71%	0.131	0.949	0.39	0.57	-	-	0	81%	1
5MDO_C8E_B_404	48%	70%	0.181	0.927	0.36	0.65	-	-	0	100%	1
5MDO_C8E_B_405	46%	67%	0.176	0.914	0.47	0.65	-	-	0	100%	1
5MDO_C8E_E_406	43%	65%	0.161	0.937	0.3	0.86	-	-	0	71%	1
5MDO_C8E_A_404	42%	63%	0.141	0.938	0.57	0.71	-	-	0	57%	1
5MDO_C8E_E_405	39%	73%	0.154	0.943	0.36	0.56	-	-	0	57%	1
5MDO_C8E_C_404	32%	63%	0.211	0.893	0.66	0.6	-	-	0	100%	1
5MDO_C8E_A_410	32%	59%	0.21	0.891	0.61	0.82	-	-	0	100%	1
5MDO_C8E_D_404	30%	55%	0.177	0.903	0.58	1.01	-	1	0	67%	1
5MDO_C8E_A_407	27%	60%	0.187	0.902	0.57	0.81	-	-	2	67%	1
5MDO_C8E_A_408	16%	74%	0.238	0.896	0.47	0.43	-	-	0	57%	1
5MDO_C8E_E_404	16%	51%	0.212	0.901	0.58	1.19	-	1	0	38%	1
5MDO_C8E_A_405	15%	68%	0.206	0.88	0.46	0.62	-	-	0	43%	1
5MDO_C8E_A_409	12%	75%	0.245	0.888	0.44	0.44	-	-	0	48%	1
5MDO_C8E_A_406	12%	57%	0.239	0.88	0.63	0.88	-	-	0	48%	1
5MDO_C8E_D_405	12%	58%	0.254	0.866	0.55	0.9	-	-	0	62%	1
5MDO_C8E_D_406	12%	67%	0.241	0.868	0.47	0.63	-	-	0	52%	1
7X5P_C8E_A_405	98%	81%	0.046	0.978	0.43	0.33	-	-	2	100%	1
8XWO_C8E_A_402	93%	73%	0.046	0.989	0.46	0.46	-	-	2	76%	1
8JUR_C8E_A_401	59%	71%	0.121	0.904	0.41	0.55	-	-	1	100%	1
7EQM_C8E_A_401	59%	75%	0.08	0.938	0.39	0.48	-	-	1	57%	1
7EQR_C8E_A_403	54%	71%	0.1	0.942	0.52	0.46	-	-	0	57%	1
2VQI_C8E_B_1638	99%	80%	0.038	0.989	0.38	0.39	-	-	0	100%	1
2XE5_C8E_A_1344	99%	66%	0.042	0.988	0.47	0.66	-	-	0	100%	1
1BH3_C8E_A_290	99%	21%	0.048	0.988	1.14	2.01	2	8	2	100%	1
1O79_C8E_C_700	98%	30%	0.055	0.991	0.86	1.79	-	6	0	100%	1
2R8A_C8E_A_501	98%	21%	0.057	0.993	0.97	2.18	-	6	7	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 5MDO | pdb_00005mdo

C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

C8E is a Ligand Of Interest in 5MDO designated by the RCSB

5MDO | pdb_00005mdo