GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5MI3 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5MI3_GDP_B_402 83% 44% 0.123 0.9821.01 1.14 2 300100%1
5MI3_GDP_A_402 77% 43% 0.146 0.9850.84 1.35 1 400100%1
3U6B_GDP_A_402 91% 61% 0.101 0.9870.9 0.62 1 -00100%1
2HCJ_GDP_A_999 88% 53% 0.106 0.9820.94 0.88 2 300100%1
2HDN_GDP_L_6999 83% 35% 0.12 0.9781.07 1.46 2 700100%1
5MI8_GDP_A_403 83% 55% 0.12 0.9780.85 0.87 2 200100%1
4P3Y_GDP_A_402 82% 45% 0.133 0.9880.88 1.25 - 400100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
5KY2_GDP_A_403 100% 48% 0.036 0.9890.98 1.04 1 100100%1
8CNJ_GDP_B_201 100% 56% 0.04 0.9920.91 0.77 1 -00100%1