5YJ0
EF2: S-Thalidomide
EF2 is a Ligand Of Interest in 5YJ0 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5YJ0_EF2_n_501 | 93% | 12% | 0.07 | 0.963 | 2.17 | 1.91 | 4 | 11 | 0 | 0 | 100% | 1 |
5YJ0_EF2_G_501 | 91% | 12% | 0.08 | 0.967 | 2.16 | 1.93 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_J_501 | 90% | 12% | 0.076 | 0.959 | 2.2 | 1.92 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_A_501 | 90% | 12% | 0.078 | 0.96 | 2.2 | 1.89 | 4 | 13 | 0 | 0 | 100% | 1 |
5YJ0_EF2_k_501 | 89% | 12% | 0.07 | 0.948 | 2.2 | 1.91 | 4 | 10 | 0 | 0 | 100% | 1 |
5YJ0_EF2_S_501 | 89% | 12% | 0.078 | 0.955 | 2.17 | 1.9 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_V_501 | 88% | 12% | 0.079 | 0.955 | 2.16 | 1.97 | 4 | 13 | 0 | 0 | 100% | 1 |
5YJ0_EF2_q_501 | 88% | 12% | 0.078 | 0.952 | 2.15 | 1.92 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_P_501 | 87% | 12% | 0.079 | 0.952 | 2.16 | 1.92 | 5 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_b_501 | 87% | 12% | 0.079 | 0.951 | 2.18 | 1.88 | 4 | 13 | 0 | 0 | 100% | 1 |
5YJ0_EF2_M_501 | 85% | 12% | 0.085 | 0.951 | 2.19 | 1.86 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_t_501 | 85% | 12% | 0.091 | 0.956 | 2.19 | 1.87 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_h_501 | 84% | 12% | 0.088 | 0.95 | 2.17 | 1.96 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_D_501 | 84% | 12% | 0.086 | 0.947 | 2.17 | 1.9 | 4 | 12 | 0 | 0 | 100% | 1 |
5YJ0_EF2_e_501 | 82% | 12% | 0.084 | 0.94 | 2.21 | 1.85 | 4 | 11 | 0 | 0 | 100% | 1 |
5YJ0_EF2_Y_501 | 82% | 12% | 0.09 | 0.944 | 2.18 | 1.89 | 4 | 12 | 0 | 0 | 100% | 1 |
4TZC_EF2_A_504 | 90% | 2% | 0.082 | 0.966 | 3.77 | 3.24 | 5 | 12 | 0 | 0 | 100% | 1 |
5YIZ_EF2_J_501 | 88% | 13% | 0.083 | 0.957 | 2.13 | 1.87 | 4 | 12 | 0 | 0 | 100% | 1 |
7BQU_EF2_A_501 | 75% | 3% | 0.105 | 0.938 | 3.67 | 2.27 | 10 | 10 | 0 | 0 | 100% | 1 |
5AMI_EF2_B_151 | 95% | 4% | 0.069 | 0.975 | 2.56 | 3.03 | 6 | 13 | 0 | 0 | 100% | 1 |
5AMJ_EF2_A_151 | 92% | 5% | 0.081 | 0.971 | 2.65 | 2.76 | 8 | 10 | 0 | 0 | 100% | 1 |
7PSO_EF2_B_202 | 91% | 7% | 0.083 | 0.97 | 2.12 | 2.68 | 5 | 12 | 0 | 0 | 100% | 1 |
4V2Y_EF2_B_151 | 91% | 4% | 0.072 | 0.958 | 2.78 | 3.08 | 6 | 13 | 0 | 0 | 100% | 1 |