5YJ0


EF2: S-Thalidomide

EF2 is a Ligand Of Interest in 5YJ0 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5YJ0_EF2_n_501 93% 12% 0.07 0.9632.17 1.91 4 1100100%1
5YJ0_EF2_G_501 91% 12% 0.08 0.9672.16 1.93 4 1200100%1
5YJ0_EF2_J_501 90% 12% 0.076 0.9592.2 1.92 4 1200100%1
5YJ0_EF2_A_501 90% 12% 0.078 0.962.2 1.89 4 1300100%1
5YJ0_EF2_k_501 89% 12% 0.07 0.9482.2 1.91 4 1000100%1
5YJ0_EF2_S_501 89% 12% 0.078 0.9552.17 1.9 4 1200100%1
5YJ0_EF2_V_501 88% 12% 0.079 0.9552.16 1.97 4 1300100%1
5YJ0_EF2_q_501 88% 12% 0.078 0.9522.15 1.92 4 1200100%1
5YJ0_EF2_P_501 87% 12% 0.079 0.9522.16 1.92 5 1200100%1
5YJ0_EF2_b_501 87% 12% 0.079 0.9512.18 1.88 4 1300100%1
5YJ0_EF2_M_501 85% 12% 0.085 0.9512.19 1.86 4 1200100%1
5YJ0_EF2_t_501 85% 12% 0.091 0.9562.19 1.87 4 1200100%1
5YJ0_EF2_h_501 84% 12% 0.088 0.952.17 1.96 4 1200100%1
5YJ0_EF2_D_501 84% 12% 0.086 0.9472.17 1.9 4 1200100%1
5YJ0_EF2_e_501 82% 12% 0.084 0.942.21 1.85 4 1100100%1
5YJ0_EF2_Y_501 82% 12% 0.09 0.9442.18 1.89 4 1200100%1
4TZC_EF2_A_504 90% 2% 0.082 0.9663.77 3.24 5 1200100%1
5YIZ_EF2_J_501 88% 13% 0.083 0.9572.13 1.87 4 1200100%1
7BQU_EF2_A_501 75% 3% 0.105 0.9383.67 2.27 10 1000100%1
5AMI_EF2_B_151 95% 4% 0.069 0.9752.56 3.03 6 1300100%1
5AMJ_EF2_A_151 92% 5% 0.081 0.9712.65 2.76 8 1000100%1
7PSO_EF2_B_202 91% 7% 0.083 0.972.12 2.68 5 1200100%1
4V2Y_EF2_B_151 91% 4% 0.072 0.9582.78 3.08 6 1300100%1