GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6I0M designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6I0M_GDP_B_603 | 58% | 41% | 0.175 | 0.955 | 0.99 | 1.3 | 1 | 4 | 3 | 0 | 100% | 1 |
| 6I0M_GDP_A_603 | 42% | 39% | 0.225 | 0.944 | 1.02 | 1.36 | 1 | 5 | 1 | 0 | 100% | 1 |
| 6I0M_GDP_A_602 | 32% | 40% | 0.227 | 0.9 | 0.97 | 1.36 | 1 | 4 | 10 | 0 | 100% | 1 |
| 6I0M_GDP_B_602 | 27% | 41% | 0.28 | 0.927 | 0.94 | 1.33 | 1 | 4 | 1 | 0 | 100% | 0.74 |
| 6I0M_GDP_B_604 | 21% | 37% | 0.219 | 0.83 | 0.99 | 1.45 | 1 | 4 | 0 | 0 | 100% | 0.48 |
| 6I0M_GDP_A_604 | 17% | 40% | 0.256 | 0.832 | 0.92 | 1.41 | 1 | 4 | 2 | 0 | 100% | 0.56 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 4PZZ_GDP_A_201 | 100% | 54% | 0.035 | 0.989 | 0.92 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
