UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 6KIH designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6KIH_UDP_B_701Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6KIH_UDP_B_701Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6KIH_UDP_B_701 81% 3% 0.115 0.9683.25 2.68 13 1000100%1
6KIH_UDP_A_602 72% 3% 0.137 0.9623.31 2.83 15 1130100%1
6KIH_UDP_G_701 71% 4% 0.136 0.9573.12 2.67 13 1110100%1
6KIH_UDP_F_602 67% 3% 0.144 0.9523.53 2.82 14 1340100%1
6KIH_UDP_C_602 66% 3% 0.147 0.9543.23 2.76 12 1220100%1
6KIH_UDP_E_602 65% 3% 0.156 0.9593.34 2.9 13 1430100%1
6KIH_UDP_H_602 64% 3% 0.144 0.9443.29 2.81 13 1320100%1
6KIH_UDP_D_602 64% 2% 0.153 0.9523.51 2.98 15 1220100%1
6KIH_UDP_K_602 62% 3% 0.149 0.9423.39 2.88 13 1430100%1
6KIH_UDP_I_602 59% 3% 0.152 0.9353.24 2.81 12 1330100%1
6KIH_UDP_J_701 35% 3% 0.214 0.9023.34 2.66 12 1410100%1
6KIH_UDP_L_602 32% 2% 0.216 0.8893.43 3.05 12 1430100%1
8X3Q_UDP_C_401 100% 3% 0.015 0.9983.32 2.69 13 1300100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
2B69_UDP_A_900 100% 42% 0.032 0.9921.03 1.21 2 400100%1
4GYW_UDP_C_1101 100% 37% 0.037 0.9881.03 1.45 2 400100%1