Ligand validation:6PPG

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6PPG designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6PPG_NAG_F_201	14%	30%	0.235	0.782	0.51	2.23	-	4	0	0	100%	0.9333
6PPG_NAG_G_201	8%	17%	0.236	0.707	0.71	2.8	-	5	0	0	100%	0.9333
6HGO_NAG_D_201	66%	70%	0.098	0.901	0.3	0.85	-	1	1	0	100%	0.9333
5NAN_NAG_E_201	48%	75%	0.138	0.882	0.39	0.57	-	-	0	0	100%	0.9333
3JVF_NAG_C_305	36%	42%	0.212	0.908	0.67	1.57	-	3	1	0	100%	0.9333
8RUU_NAG_Y_201	34%	11%	0.215	0.9	2.21	1.93	3	3	3	0	100%	0.9333
1JPY_NAG_Y_241	21%	42%	0.147	0.757	0.92	1.33	-	3	2	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.