PRD_000226

Viomycin

PRD_000226 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3KNJ.

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Chemical Component Summary
Name	Viomycin
Identifiers	(3S)-N-[(3S,6Z,9S,12S,15S)-6-[(aminocarbonylamino)methylidene]-3-[(4S,6S)-2-azanyl-4-oxidanyl-1,4,5,6-tetrahydropyrimidin-6-yl]-9,12-bis(hydroxymethyl)-2,5,8,11,14-pentakis(oxidanylidene)-1,4,7,10,13-pentazacyclohexadec-15-yl]-3,6-bis(azanyl)hexanamide
Formula	C₂₅ H₄₃ N₁₃ O₁₀
Molecular Weight	685.69
Type	PEPTIDE-LIKE
Isomeric SMILES	C1[C@H](NC(=N[C@H]1O)N)[C@H]2C(=O)NC[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N/C(=C\NC(=O)N)/C(=O)N2)CO)CO)NC(=O)C[C@H](CCCN)N
InChI	InChI=1S/C25H43N13O10/c26-3-1-2-10(27)4-16(41)32-12-6-30-23(47)18(11-5-17(42)37-24(28)36-11)38-20(44)13(7-31-25(29)48)33-21(45)14(8-39)35-22(46)15(9-40)34-19(12)43/h7,10-12,14-15,17-18,39-40,42H,1-6,8-9,26-27H2,(H,30,47)(H,32,41)(H,33,45)(H,34,43)(H,35,46)(H,38,44)(H3,28,36,37)(H3,29,31,48)
InChIKey	GXFAIFRPOKBQRV-UHFFFAOYSA-N
Composition	Polymer Sequences: KBE-DPP-SER-SER-UAL-5OH
BIRD class	ANTIBIOTIC
Represented As	POLYMER
Compound Details	n/a
Description	n/a

Chemical Details
Formal Charge	0
Atom Count	91
Chiral Atom Count	7
Bond Count	92
Aromatic Bond Count	0

Related Resource References

Resource Name	Reference
PubChem	3037981, 135398671
ChEMBL	CHEMBL3085436
ChEBI	CHEBI:15782, CHEBI:94788

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.