PRD_002330

Darobactin

Created: 2021-04-12
Last modified:  2023-06-11

PRD_002330 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 7NRI.

Chemical Details

Formal Charge0
Atom Count126
Chiral Atom Count8
Bond Count132
Aromatic Bond Count26
Toggle HydrogenToggle Labels

Chemical Component Summary

NameDarobactin
FormulaC47 H56 N11 O12
Molecular Weight967.014
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgram Version Descriptor
SMILESCACTVS3.385N[CH]1Cc2c[nH]c3c(O[CH]4[CH](NC(=O)[CH](CC(N)=O)NC1=O)C(=O)N[CH](CO)C(=O)N[CH]([CH](CCC[NH3+])c5ccc6c([nH]cc46)c5)C(=O)N[CH](CO)C(=O)N[CH](Cc7ccccc7)C(O)=O)cccc23
SMILESOpenEye OEToolkits2.0.7c1ccc(cc1)CC(C(=O)O)NC(=O)C(CO)NC(=O)C2C(c3ccc4c(c3)[nH]cc4C5C(C(=O)NC(C(=O)N2)CO)NC(=O)C(NC(=O)C(Cc6c[nH]c7c6cccc7O5)N)CC(=O)N)CCC[NH3+]
Canonical SMILESCACTVS3.385 N[C@H]1Cc2c[nH]c3c(O[C@H]4[C@H](NC(=O)[C@H](CC(N)=O)NC1=O)C(=O)N[C@@H](CO)C(=O)N[C@@H]([C@@H](CCC[NH3+])c5ccc6c([nH]cc46)c5)C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc7ccccc7)C(O)=O)cccc23
Canonical SMILESOpenEye OEToolkits2.0.7 c1ccc(cc1)C[C@@H](C(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H]2C(c3ccc4c(c3)[nH]cc4[C@@H]5[C@@H](C(=O)N[C@H](C(=O)N2)CO)NC(=O)[C@@H](NC(=O)[C@H](Cc6c[nH]c7c6cccc7O5)N)CC(=O)N)CCC[NH3+]
InChIInChI1.06 InChI=1S/C47H55N11O12/c48-13-5-9-25-23-11-12-27-28(19-51-30(27)16-23)40-39(58-42(63)31(17-36(50)61)53-41(62)29(49)15-24-18-52-37-26(24)8-4-10-35(37)70-40)46(67)56-34(21-60)44(65)57-38(25)45(66)55-33(20-59)43(64)54-32(47(68)69)14-22-6-2-1-3-7-22/h1-4,6-8,10-12,16,18-19,25,29,31-34,38-40,51-52,59-60H,5,9,13-15,17,20-21,48-49H2,(H2,50,61)(H,53,62)(H,54,64)(H,55,66)(H,56,67)(H,57,65)(H,58,63)(H,68,69)/p+1/t25-,29-,31-,32-,33-,34-,38-,39-,40+/m0/s1
InChIKeyInChI1.06 HRMCRRLPTVSYHJ-KUDSBEMESA-O